the biology in OA
Tried my hand at the Metadata and Query Format sessions during the morning got to realize very soon that this conversation was very much for those in the field. Even my coursework in Bibliographic Control at the Faculty of Information Studies didn't help me negotiate the technical jargon and complex systems (each presenter was exhibiting "streamed-down" versions) . . . yet the Q&A after each proved their were engaged listeners who were trying to hammer out their own solutions in their own environments and came, perhaps to gain a few clues from their peers. Strong human interests shared in the body collect of OA.
Lunch offered an opportunity to see a few "breaks in the skin" of the OA community,
So I was a little more peeked to hear Gunther Eysenbach question/comment in the early afternoon session during the Stranack session on OJS (my source for the Hindawi insights) when he came to the piece on Lemon8. This is a great little convertor that turns a Word doc into XML in minutes. In fact, in a later session Tarek Loubani of Open Medicine stated this one software "has changed everything for me" . . . in 5 minutes it turns anything into XML, and then O minutes (measurements in nanoseconds he boasts!) into a PDF other other formats . . . and generates HTML on the fly. "This should be at the top of the tool list for anyone and everyone in publishing." Back to Gunther's question, what does it mean to take something that was originally developed somewhere else and then to rebrand it as Lemon8 . . . and in of all places, at PKP. "Does this not undermine the expectations and intentions of OA?" Turns out the code was written by the developer while at the Journal of Medical Internet Research (JMIR) who is now over at PKP . . . launching this new sweetheart. The only reply Kevin could muster, being put on the spot in this way, was "you'll have to ask - - - who knows more about it." [Kevin is a great guy, I need to add, and his workshop walking us through OJS was excellent yesterday . . . and the quick presentation and highlights today were informative for the room, etc. etc.] How does OA handle issues of "attribution" which is really all that Gunther's question was pointing to (and JIMR is his brainchild, as PKP is Willinsky's). So "cracks in the skin."
I got a chance to speak with Tarek after his presentation and ask a bit about this Lemon8 situation (I've promoted this tool enough to flag some metrics crawler so I'll mention that Journal of Internet Medical Research is the leading OPEN ACCESS peer-reviewed transdisciplinary journal on health and health care in the Internet age and Gunther Eysenbach launched it as an intentional high level competitive OA journal to show the world this can be done ~it ranks 2nd in the field!! ~ just to level the bibliometrics if anyone counting). Tarek suggested there may simply be an instance of "forking," where OA software seems to be going in one direction and a developer sees other promises for it . . . thereby releasing an alternative expression. In fact, in some instances the forked paths might re-converge at some point down the line suggested Tarek at which point Rea Devakos of TSpace, overhearing my whole exploration of this theme, "the issue still is a simple expectation of attribution . . . and in fact if you do scroll to the bottom of the webpage of --8 you'll see something resembling this credit." But is it enough? and when I did try to look for the credit I couldn't find it! So no matter how much "public knowledge" is out there, no matter how much code is available OA and environments are accessible regardless the ability to pay (I use to get my health care at Cook County Hospital when I couldn't afford Insurance while a student-pastor . . .) we are still faced with the question of what it means to be human, to have feelings, to have attachments, and to presume standards of rightness. How do we negotiate toward those regions? I think there is room for a conference that explores these themes . . .

2 Comments:
The Lemon8 demo site http://pkp.sfu.ca/l8x/demo/ (Archived by WebCite® at http://www.webcitation.org/5Yu3LydoX)indeed actually says "Lemon8-XML was inspired by early work undertaken for the Journal of Medical Internet Research", which sounds like PKP did some contract work "for" JMIR, rather than being a true attribution (an attribution usually uses the word "by" and not "for"). The truth is that over many years I used (and continue to use) the revenues of the Journal of Medical Internet Research, created and hosted at the e-publishing and Open Access research group (which I direct), to fund the development of free publishing software such as scripts to convert Word documents into XML documents (as well as contributions to the OJS software). We have released the code under a GNU license (this code carries the (c) of Gunther Eysenbach, MJ Suhonos, and Juan Alperin, with MJ having done the main coding work on this). Other developers whom I funded over the years (e.g. Alf Eaton) also made contributions. Having released this as open source code under a GNU license, MJ has of course every right in a legal sense to continue working on this project under a PKP label, however, there is a deeper, ethical question here, in that the PKP group is branding this as a PKP project as a PKP project, while I still very much see this as a project of our group (and in fact I continue to pay developers to work on this). By doing so, they are actually reducing the chances of my group to get funding for this project. Even if the code has meanwhile been completely rewritten (I have not yet compared the code of Lemon8 line by line with the code of our scripts, as I have not actually seen the Lemon8 code yet) and "generalized", I still claim an intellectual stake and ownership in this project. My point is that openness - especially in an academic environment only works if contributors - are acknowledged. All it takes is a simple and clear attribution ("builds on early work undertaken by Gunther Eysenbach, MJ Suhonos, Juan Alperin, Alf Eaton and others at the e-publishing and open access research group at the CGEI in Toronto, funded by the Journal of Medical Internet Research"), which so far I do not see on the Lemon8 homepage, and did not hear or see in any of the presentations at ELPUB. What groups usually do to avoid these kinds of irritations is to contact the other group before they decide to take over a project, to brand/position this as a collaboration between the two groups (rather than as a "PKP project"), and to seek joint funding for the continued development.
Gunther Eysenbach
Principal Investigator, e-publishing & Open Access research lab, CGEI, UHN/U of T
Speaking on behalf of PKP, we're always happy to improve our acknowledgement of others' work. While we are not using the open source code developed and licensed under Gunther's direction in this case -- although we are in other cases, and with appreciation and credit -- we do want to continue to acknowledge that the idea originated within his research group. We'll be including the following statement on its Lemon8-XML webpage and wherever else it seems relevant:
"The idea for Lemon8-XML arose out of the very innovative work undertaken by Gunther Eysenbach, MJ Suhonos, Juan Alperin, Alf Eaton and others at the e-publishing and open access research group at the CGEI in Toronto, funded by the Journal of Medical Internet Research. Long may they run."
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